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Getting Started with Push-Button Bioinformatics in BaseSpace

1064 views | 6 years ago

Learn how to login to BaseSpace and to navigate the BaseSpace interface for accessing sequencing data. This video will demonstrate the differences between BaseSpace Runs and Projects as well as how...

Push-Button De Novo Assembly in BaseSpace

954 views | 6 years ago

Learn how to easily perform de Novo assembly of microbial genomes in BaseSpace using the DNAStar Seqman NGen BaseSpace App

Push-Button Data Visualization in BaseSpace

475 views | 6 years ago

Learn how to visualize genomic data in BaseSpace. This video will demonstrate launching the Broad's Integrated Genomics Viewer (IGV) BaseSpace App and navigating through a matched tumor-normal dataset...

Push-Button Data Management in BaseSpace: From Runs to Projects

253 views | 6 years ago

Learn more about the two major data areas in BaseSpace and how to utilize each one.

Push-Button Data Sharing in BaseSpace

100 views | 6 years ago

Learn how to easily share data with other users in BaseSpace using only a few clicks.

How to Open the Tumor/Normal Sequencing Data in BaseSpace

425 views | 7 years ago

This video describes how to log into BaseSpace to access the Tumor/Normal Sequencing data. It also provides a brief description of BaseSpace Project page including Quick Launch buttons and hyperlinks,...

Viewing Tumor/Normal Sequencing Data in BaseSpace Using the Broad IGV

912 views | 7 years ago

This video shows how to use IGV to visualize variants identified by the Cancer Sequencing Workflow between the Tumor and Normal samples. Here we highlight an indel in TP53 and a translocation between...