TruSight Oncology Comprehensive (EU)

The first CE-marked IVD kitted solution for comprehensive genomic profiling (CGP) of DNA and RNA variants, plus MSI and TMB, for multiple solid tumor types.

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Overview

TruSight Oncology Comprehensive (EU) is a CE-marked IVD next-generation sequencing (NGS)-based CGP for analyzing > 28 solid tumor types using minimal tissue. 

  • Detect DNA plus RNA variants along with biomarker signatures such as TMB and MSI

  • Save time and money by assessing multiple biomarkers in a single test

  • Enable targeted therapies and clinical trials with actionable, easy-to-interpret results

Key biomarkers

Content includes key biomarkers associated with guidelines, drug labels, European Society for Medical Oncology (ESMO) recommendations, and clinical trials.

Companion diagnostic

TruSight Oncology Comprehensive (EU) is indicated as a companion diagnostic (CDx) test to identify cancer patients with solid tumors who are positive for NTRK1, NTRK2, or NTRK3 gene fusions, for treatment with VITRAKVI (larotrectinib) in accordance with the approved therapeutic labeling. 

 

Additional companion diagnostic claims are under development.

In-house CGP

Rely on a distributed sample-to-answer solution that can be implemented by local labs. Offer precision oncology in your institution and keep the data and sample in-house, reducing the likelihood of quantity not sufficient (QNS) issues.


Intended use

TruSight Oncology Comprehensive (EU) is an in vitro diagnostic test that uses targeted next generation sequencing to detect variants in 517 genes using nucleic acids extracted from formalin-fixed, paraffin embedded (FFPE) tumor tissue samples from cancer patients with solid malignant neoplasms using the Illumina NextSeq 550Dx instrument. The test can be used to detect single nucleotide variants, multinucleotide variants, insertions, deletions and gene amplifications from DNA, and gene fusions and splice variants from RNA. The test also reports a Tumor Mutational Burden (TMB) score and Microsatellite Instability (MSI) status. 

The test is intended as a companion diagnostic to identify cancer patients for treatment with the targeted therapy listed in Table 1, in accordance with the approved therapeutic product labeling. In addition, the test is intended to provide tumor profiling information for use by qualified healthcare professionals in accordance with professional guidelines and is not conclusive or prescriptive for labeled use of any specific therapeutic product.

Table 1: Companion diagnostics indication

Tumor Type Biomarkers Targeted Therapy
Solid Tumors NTRK1, NTRK2, and NTRK3 gene fusions VITRAKVI® (larotrectinib)

Specifications

Required products

  • TruSight Oncology Comprehensive (EU) Kit, which includes reagents for 24 DNA and 24 RNA library prep and enrichment reactions
  • A one-time purchase of TruSight Oncology Comprehensive Enablement Services is required for training and workflow instruction
  • DNA and RNA controls for monitoring the analytical performance of the assay
  • NextSeq 550Dx High Output Reagent Kit v2.5 (300 cycles) IVD
  • NextSeq 550Dx Instrument
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Applications

TruSight Oncology Comprehensive (EU) is an in vitro diagnostic test that generates a comprehensive genomic profile of a patient’s tumor, informing therapy decisions according to clinical guidelines.

Example workflow

1
Prep

TruSight Oncology Comprehensive (EU)

3
Analyze

Local Run Manager TruSight Oncology Comprehensive (EU) Analysis Module (on-instrument software)

Related applications and methods

Figures

Fully automated sequencing and data analysis

Batch up to seven patient samples and two control samples per run. Library prep and enrichment take 2 days, followed by a fully automated workflow on the NextSeq 550Dx Instrument. The entire workflow takes 4–5 days.

Variant types and genomic signatures detected

Clinical report for TruSight Oncology Comprehensive (EU)

Reported variants categorized as clinically significant or potentially clinically significant based on an expertly curated knowledge base including clinical guidelines, drug labels, clinical trials, and peer-reviewed literature. Easy-to-read output helps increase confidence in treatment decisions.

Subset of genomic tumor profiling biomarkers for multiple cancer types​

Tumor type Selected genes with biomarkers of clinical significancea
  Pan-cancer BRAF FGFR1 FGFR2 FGFR3 MSI NTRK1
NTRK2 NTRK3 RET TMB    
  Breast cancer AKT1 BRCA1 BRCA2 ERBB2 ESR1 PALB2
PIK3CA PTEN    
  Colorectal cancer BRAF ERBB2 KRAS NRAS POLE MSI
  Melanoma BRAF KIT NRAS      
  Non-small cell lung cancer ALK BRAF EGFR ERBB2 KRAS MET
NRG1 RET ROS1      
  Ovarian BRCA1 BRCA2      
  Pancreatic cancer BRCA1 BRCA2 KRAS NRG1 PALB2  
  Prostate cancer ATM BRCA1 BRCA2 PALB2 PTEN

a. Genes with biomarkers of clinical significance linked to major oncology guidelines. MSI, microsatellite instability; TMB, tumor mutational burden.

TruSight Oncology Comprehensive (EU) Kit

20063092

FFPEから単離された24のDNAサンプルと24のRNAサンプルの抽出、ライブラリー調製、および定量のための試薬が含まれます。NextSeq 550Dxシーケンス試薬は別売りです。

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TruSight Oncology DNA Control

20065041

ライブラリー調製、シーケンス、解析の分析性能をモニタリングするための定性的IVDコントロールが含まれます。

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TruSight Oncology RNA Control

20065042

ライブラリー調製、シーケンス、解析の分析性能をモニタリングするための定性的IVDコントロールが含まれます。

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NextSeq 550Dx High Output Reagent Kit v2.5 (300 cycles)

20028871

医療機器届出済みNextSeq 550Dxシステムでの300サイクルランをサポートするため、高出力フローセル1個、バッファーカートリッジ1個、クラスター試薬およびシーケンス試薬を含む試薬カートリッジ1個が含まれます。すべての製品が臨床検査用シーケンス試薬として登録されています。

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NextSeq 550 Dx Sequencing System

20005715

NextSeq 550Dx システムは、システムで実行する臨床検査アッセイと併用してDNAライブラリーのシーケンスを行うことを目的としています。NextSeq 550Dx システムは、登録、認証、または承認済みの特定の臨床検査試薬と解析ソフトウェアと共に使用されます。NextSeq 550Dx システムはデュアルオペレーション構成に対応しており、診断(Dx)モードと研究(RUO)モードのいずれでも使用できます。生殖細胞系列バリアントモジュールと体細胞バリアントモジュールを始めとする臨床検査用シーケンスアッセイは、診断モードで実行します。診断モードで利用できるのはIVDシーケンス試薬のみです。

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TSO Comprehensive Enablement Services

20066472

4日間のハンズオントレーニングとワークフロー指示(ライブラリー調製、エンリッチメント、シーケンス、データ解析)を含む、2人までのオペレーターが1回で購入する必要があります。

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FAQs

The test was validated across > 350 unique FFPE samples and > 55 different tumor types. Results were compared to orthogonal methods to ensure accurate, reproducible, and consistent results.

Illumina offers a comprehensive support program that provides onboarding to expedite test verification, lab training, verification protocols, training certification, 24/5 technical support, support from our Medical Affairs team for medical inquiries, and educational and marketing assets to share with your local health care providers. Contact your local Illumina Account Manager for more details about the comprehensive support program.

Reimbursement differs based on the country, clinical setting, and services provided. Currently, national or regional funding is available in some European countries. Illumina has established a dedicated Market Access team that is actively working with payers to further expand CGP test reimbursement across the globe. Contact your local Illumina Account Manager with questions about coverage.

Illumina has established multiple partnerships with pharma companies to develop a growing pipeline of CDx indications pending regulatory approvals, that include but are not limited to RET (Eli Lilly),1 ROS1 (Roche),2 HRD (Myriad Genetics, Merck),3,4 and MSI (Bristol Myers Squibb).3

The minimum recommended tissue volume is 1 mm3 with a minimum of 20% tumor cell content by area required to detect somatic driver mutations; ≥ 30% tumor content is required to detect MSI-high. A minimum of five biopsy slides is recommended (10 µM sections, 20 mm2 tissue area each).

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NovaSeq Xシリーズのご購入

進化したケミストリー、光学、インフォマティクスを融合させ、卓越したシーケンシング速度とデータ品質、優れたスループットとスケーラビリティをお届けします。

MiSeq Reagent Kit v3

以前のバージョンと比較して、クラスター密度とリード長が増加し、シーケンスのクオリティスコアが改善、最適化された試薬キット。

TruSight Oncology 500 v2

FFPE組織から、すべての主要バリアントクラスに加え、重要なバイオマーカー(TMB、MSI、HRD)を網羅する大規模な腫瘍横断型パネルでCGPを実現します。

Illumina DNA Prep

幅広いシーケンス アプリケーションに対応するライブラリーを調製するための、高速で統合されたワークフロー。

References

1. lllumina and Loxo Oncology to partner on developing next-generation sequencing-based pan-cancer companion diagnostics. https://www.businesswire.com/news/home/20180410005649/en/. Accessed July 24, 2023.

2. Roche, Illumina partner on next-generation sequencing IVD, CDx development, marketing. https://www. genomeweb.com/business-news/roche-illumina-partnernext-generation-sequencing-ivd-cdx-developmentmarketing#.YWhVkhrMKUk. Accessed July 24, 2023.

3. Illumina announces new and expanded oncology partnerships with Bristol Myers Squibb, Kura Oncology, Myriad Genetics, and Merck to advance comprehensive genomic profiling. https://www.businesswire.com/news/home/20210111005930/en/Illumina-Announces-New-and-Expanded-Oncology-Partnerships-with-Bristol-Myers-Squibb-Kura-Oncology-Myriad-Genetics-and-Merck-to-Advance-Comprehensive-Genomic-Profiling. Accessed July 24, 2023.

4. Illumina partners with Merck to develop and commercialize companion diagnostic and research tests for use in identifying specific cancer mutations. https://www.prnewswire.com/news-releases/illumina-partners-with-merck-to-develop-and-commercialize-companion-diagnostic-and-research-tests-for-use-in-identifying-specific-cancer-mutations-301369838.html. Accessed July 24, 2023.

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