Simple DNA Sequence Analysis Tools
Illumina sequencing systems can produce gigabases of sequencing data per day. Our intuitive bioinformatics solutions help researchers make sense of all those base calls. We offer a wide range of next-generation sequencing (NGS) data analysis software tools, including push-button tools for DNA sequence alignment, variant calling, and data visualization.
Analyze DNA sequencing data from large or small whole genomes, whole exomes, targeted gene regions, and more with our user-friendly tools.
Benefits of DNA Sequencing Data Analysis with Illumina Tools
Data generated on Illumina sequencing instruments can be automatically transferred and stored securely in BaseSpace Sequence Hub. This genomics cloud computing environment features a collection of expert-preferred NGS data analysis apps that support a broad range of studies and simplify NGS data management. These apps provide scalable bioinformatics solutions for analysis of DNA sequencing data and other Illumina data.
The Illumina DRAGEN (Dynamic Read Analysis for GENomics) Bio-IT Platform provides highly accurate, ultra-rapid secondary analysis of NGS data, including data from whole-genome, exome, and targeted DNA sequencing experiments. Available in BaseSpace Sequence Hub or on-premise, this platform offers a variety of accelerated secondary analysis pipelines, ranging from Germline to Somatic (T/N and Tumor-only), Joint Genotyping, Methylation, a stand-alone map and align pipeline, and more.
Learn more about:
Scaling from Exomes to Genomes
The DRAGEN platform enables GeneDx to scale to whole-genome analysis while keeping costs low, turnaround times short, and accuracy high.
BaseSpace Apps for DNA Sequence Analysis:
- Are accessible to any researcher, regardless of bioinformatics experience
- Support a broad range of applications, including whole-genome, targeted, and exome sequencing data analysis, as well as de novo sequencing, methylation sequencing, metagenomics studies, and more
- Integrate with Illumina sequencing systems
- Present results in easy-to-interpret reports
- Allow instant data sharing with collaborators around the world
| Method | Featured App |
|---|---|
| Whole-Genome Sequencing | DRAGEN Germline DRAGEN Somatic Pipeline |
| Tumor-Normal Sequencing | DRAGEN Somatic Pipeline |
| Exome Sequencing | BaseSpace Enrichment |
| Amplicon Sequencing | BaseSpace DNA Amplicon |
| Methylation Sequencing | DRAGEN Methylation Pipeline |
| 16S rRNA Sequencing | BaseSpace 16S Metagenomics |
Interpretation of DNA Sequencing Data
Access powerful turnkey bioinformatics tools that empower you to turn DNA sequencing data and other genomic information into biological insight.
- BaseSpace Correlation Engine: Access a curated library of phenotypic and molecular data to compare and correlate with your DNA sequencing data.
- BaseSpace Variant Interpreter: Quickly identify and classify disease-relevant DNA sequence variants, then communicate findings in a structured report.
- Rare Variant Analysis and Interpretation: Explore research solutions that enable high-throughput labs using whole-genome sequencing to evaluate rare disease-associated variants.
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Additional Resources
Core Sequencing Lab Benefits from BaseSpace Cloud
BRC-Seq uses BaseSpace for sample tracking as well as data analysis, management, and sharing.
Illumina DRAGEN Bio-IT Platform Training
Learn more about the accurate, ultra-rapid secondary analysis platform and accompanying pipelines.
Enhance Your Secondary Analysis
The Illumina DRAGEN Bio-IT Platform offers accurate, ultra-rapid secondary analysis for a variety of applications.
BaseSpace Apps for Genome-Scale Analysis
Learn more about apps for common biological applications, including analysis of DNA sequencing data.
BaseSpace Sequence Hub Data Security
Data are secure in the Illumina cloud analysis and storage platform.
BaseSpace Sequence Hub Support
Access user guides, app release notes, and additional technical information.
BaseSpace Sequence Hub Blog
Keep up with the latest tools and functionality in BaseSpace Sequence Hub, with spotlights on useful research methods and data examples.