The Respiratory Pathogen ID/AMR Enrichment Kit (RPIP) is a next-generation sequencing based, targeted enrichment workflow that delivers highly sensitive, comprehensive pathogen detection and antimicrobial resistance (AMR) insights for 1200+ AMR alleles, 180+ bacteria, 50+ fungi, and 40+ viruses, including SARS-CoV-2. Powered by the IDbyDNA Explify Analysis Software, the flexible and scalable end-to-end workflow, coupled with broad identification of respiratory pathogens and antimicrobial resistance markers in <24 hours, delivers a rapid and cost-effective solution for detection of respiratory tract infections in clinical research settings.
Features of this workflow:
Powerful, Simple Data Analysis with the IDbyDNA Explify Platform
The Explify Respiratory ID/AMR Analysis App offers a paired and tailored data analysis solution for the Illumina Respiratory Pathogen ID/AMR Enrichment Kit. The app provides information on sample composition, including host and microbial abundance, and proportion of targeted vs. untargeted sequences.
This app is available in BaseSpace Sequence Hub. Users can select up to 35 individual samples or project folders containing any number of samples for analysis. Reports include a detailed text-based (JSON) and PDF file format.
Access this app in BaseSpace Sequence Hub
See the Explify Respiratory ID/AMR Analysis User Guide for more info.
| Respiratory Pathogen ID/AMR Enrichment Kit (Powered by IDbyDNA Explify) | Respiratory Virus Oligo Panel | |
|---|---|---|
| Automation Capability | Liquid Handling Robots | Liquid Handling Robots |
| Description | A streamlined workflow using Respiratory Pathogen ID/AMR Panel (RPIP) with Illumina RNA Prep with Enrichment, sequencing on Illumina desktop systems, and powerful analysis using Explify RPIP Software allows researchers to identify respiratory infections and co-infections, identify antimicrobial resistance, and perform strain typing of critical pathogens (SARS-CoV-2 and Flu A/B viruses) to study viral evolution and transmission. | |
| Species Category | Bacteria, Virus | Human, Virus |
| System Compatibility | MiniSeq, MiSeq, NextSeq 550 | MiniSeq, MiSeq, NextSeq 550 |
Illumina Respiratory Pathogen ID/AMR Panel Table
Product Information Sheet | PDF < 1 MB
Product Information Sheet | PDF | 2 versions
Application Note | PDF < 1 MB
Analytical performance of the Respiratory Pathogen ID/AMR Panel
Application Note | PDF < 1 MB
Illumina RNA Prep with Enrichment
Data Sheet | PDF < 1 MB
Illumina RNA Prep with Enrichment (L) Tagmentation Documentation
Illumina RNA Prep with Enrichment (L) Tagmentation Documentation
IDbyDNA User Guide Documentation
カスタムプロトコルセレクタ
Generates customized, end-to-end instructions
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